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Index > Protein center > RAG1(Gene name) > Human
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  • RAG1 (Gene name),
  • V(D)J recombination-activating protein 1 (Protein name ),  RAG1_HUMAN from NCBI database.
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  • Gene name:
    RAG1(RNF74);
    Protein name:
    V(D)J recombination-activating protein 1(RAG-1);
    Alternative:
    RING finger protein 74;
    Organism:
    Human (Homo sapiens). 
    General Annotation
    Sub Unit:
    Homodimer. Component of the RAG complex composed of core components RAG1 and RAG2, and associated component HMGB1 or HMGB2.
    Function:
    Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break between the RSS and the adjacent coding segment. RAG2 is not a catalytic component but is required for all known catalytic activities. DNA cleavage occurs in 2 steps: a first nick is introduced in the top strand immediately upstream of the heptamer, generating a 3'-hydroxyl group that can attack the phosphodiester bond on the opposite strand in a direct transesterification reaction, thereby creating 4 DNA ends: 2 hairpin coding ends and 2 blunt, 5'-phosphorylated ends. The chromatin structure plays an essential role in the V(D)J recombination reactions and the presence of histone H3 trimethylated at 'Lys-4' (H3K4me3) stimulates both the nicking and haipinning steps. The RAG complex also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and monospecific recognition by the B-cell antigen receptor (BCR) expressed on individual B lymphocytes. The introduction of DNA breaks by the RAG complex on one immunoglobulin allele induces ATM-dependent repositioning of the other allele to pericentromeric heterochromatin, preventing accessibility to the RAG complex and recombination of the second allele. In addition to its endonuclease activity, RAG1 also acts as a E3 ubiquitin-protein ligase that mediates monoubiquitination of histone H3. Histone H3 monoubiquitination is required for the joining step of V(D)J recombination. Mediates polyubiquitination of KPNA1.
    Subcellular Location:
    Nucleus
    Protein Attributes:
    Sequence length:
    1043
    Sequence:
    50:
    MAASFPPTLG | LSSAPDEIQH | PHIKFSEWKF | KLFRVRSFEK | TPEEAQKEKK | 
    100:
    DSFEGKPSLE | QSPAVLDKAD | GQKPVPTQPL | LKAHPKFSKK | FHDNEKARGK | 
    150:
    AIHQANLRHL | CRICGNSFRA | DEHNRRYPVH | GPVDGKTLGL | LRKKEKRATS | 
    200:
    WPDLIAKVFR | IDVKADVDSI | HPTEFCHNCW | SIMHRKFSSA | PCEVYFPRNV | 
    250:
    TMEWHPHTPS | CDICNTARRG | LKRKSLQPNL | QLSKKLKTVL | DQARQARQHK | 
    300:
    RRAQARISSK | DVMKKIANCS | KIHLSTKLLA | VDFPEHFVKS | ISCQICEHIL | 
    350:
    ADPVETNCKH | VFCRVCILRC | LKVMGSYCPS | CRYPCFPTDL | ESPVKSFLSV | 
    400:
    LNSLMVKCPA | KECNEEVSLE | KYNHHISSHK | ESKEIFVHIN | KGGRPRQHLL | 
    450:
    SLTRRAQKHR | LRELKLQVKA | FADKEEGGDV | KSVCMTLFLL | ALRARNEHRQ | 
    500:
    ADELEAIMQG | KGSGLQPAVC | LAIRVNTFLS | CSQYHKMYRT | VKAITGRQIF | 
    550:
    QPLHALRNAE | KVLLPGYHHF | EWQPPLKNVS | SSTDVGIIDG | LSGLSSSVDD | 
    600:
    YPVDTIAKRF | RYDSALVSAL | MDMEEDILEG | MRSQDLDDYL | NGPFTVVVKE | 
    650:
    SCDGMGDVSE | KHGSGPVVPE | KAVRFSFTIM | KITIAHSSQN | VKVFEEAKPN | 
    700:
    SELCCKPLCL | MLADESDHET | LTAILSPLIA | EREAMKSSEL | MLELGGILRT | 
    750:
    FKFIFRGTGY | DEKLVREVEG | LEASGSVYIC | TLCDATRLEA | SQNLVFHSIT | 
    800:
    RSHAENLERY | EVWRSNPYHE | SVEELRDRVK | GVSAKPFIET | VPSIDALHCD | 
    850:
    IGNAAEFYKI | FQLEIGEVYK | NPNASKEERK | RWQATLDKHL | RKKMNLKPIM | 
    900:
    RMNGNFARKL | MTKETVDAVC | ELIPSEERHE | ALRELMDLYL | KMKPVWRSSC | 
    950:
    PAKECPESLC | QYSFNSQRFA | ELLSTKFKYR | YEGKITNYFH | KTLAHVPEII | 
    1000:
    ERDGSIGAWA | SEGNESGNKL | FRRFRKMNAR | QSKCYEMEDV | LKHHWLYTSK | 
    1043:
    YLQKFMNAHN | ALKTSGFTMN | PQASLGDPLG | IEDSLESQDS | MEF
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
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    Related Databases
    String:
    MIM:
    Pfam:
    SMR:
    KEGG:
    UniGene:
    Uniprot:
     
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    CLIA Kit for Human RAG-1
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    Polyclonal Antibody for Human RAG-1
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    Polyclonal Antibody for Human RAG-1
    Monoclonal Antibody for Human RAG-1
    Monoclonal Antibody for Human RAG-1
    Monoclonal Antibody for Human RAG-1
    Monoclonal Antibody for Human RAG-1
    Monoclonal Antibody for Human RAG-1
    Protein for Human RAG-1
    Protein for Human RAG-1
    Protein for Human RAG-1
    Protein for Human RAG-1
    Protein for Human RAG-1

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    References
    1. 1.
      "The V(D)J recombination activating gene, RAG-1."
      Schatz D.G. , Oettinger M.A. , Baltimore D.
      Cell59:1035-1048(1989) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1);VARIANT ARG-249
    2. 2.
      NIEHS SNPs program
      Submitted (2002-07) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]
    3. 3.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    4. 4.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2);VARIANT ARG-249
      tissue: Testis.
    5. 5.
      "RAG-1 interacts with the repeated amino acid motif of the human homologue of the yeast protein SRP1."
      Cortes P. , Ye Z.-S. , Baltimore D.
      Proc. Natl. Acad. Sci. U.S.A.91:7633-7637(1994) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION OF IMPORTIN ALPHA-1 BINDING DOMAIN
    6. 6.
      "Two new variants of RAG-1 protein predicted by SSCP."
      Nomdedeu J.F. , Lasa A. , Seminago R. , Rubiol E. , Baiget M. , Soler J.
      Hum. Mutat.8:191-192(1996) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS GLY-244 AND ARG-249
    7. 7.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS T(-)B(-)NK(+) SCID HIS-624 AND LYS-722;VARIANT VAL-156
    8. 8.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS OS CYS-396; HIS-396; GLY-429; HIS-561; CYS-561; HIS-737 AND CYS-912
    9. 9.
      "Characterization of immune function and analysis of RAG gene mutations in Omenn syndrome and related disorders."
      Wada T. , Takei K. , Kudo M. , Shimura S. , Kasahara Y. , Koizumi S. , Kawa-Ha K. , Ishida Y. , Imashuku S. , Seki H. , Yachie A.
      Clin. Exp. Immunol.119:148-155(2000) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS OS CYS-396 AND ARG-885
    10. 10.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS OS TYR-328; LEU-396; PRO-401; GLN-410; MET-433; VAL-435; VAL-444; HIS-474; TRP-507; CYS-522 SER-559; CYS-624; GLY-669; LEU-753 AND GLN-975;VARIANT ILE-855
    11. 11.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS T-CMVA TRP-841 AND PRO-981
    12. 12.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS CHIDG TRP-314; TRP-507; HIS-737; GLN-778 AND TRP-975;CHARACTERIZATION OF VARIANTS CHIDG TRP-314; TRP-507; HIS-737; GLN-778 AND TRP-975
    13. 13.
      "Molecular analysis of T-B-NK+ severe combined immunodeficiency and Omenn syndrome cases in Saudi Arabia."
      Alsmadi O. , Al-Ghonaium A. , Al-Muhsen S. , Arnaout R. , Al-Dhekri H. , Al-Saud B. , Al-Kayal F. , Al-Saud H. , Al-Mousa H.
      BMC Med. Genet.10:116-116(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANTS T(-)B(-)NK(+) SCID MET-433; SER-559 AND HIS-624;VARIANTS OS HIS-396 AND PRO-401
    14. 14.
      "Highly variable clinical phenotypes of hypomorphic RAG1 mutations."
      Avila E.M. , Uzel G. , Hsu A. , Milner J.D. , Turner M.L. , Pittaluga S. , Freeman A.F. , Holland S.M.
      Pediatrics126:E1248-E1252(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANT CYS-474
    15. 15.
      "Novel mutations in RAG1/2 and ADA genes in Israeli patients presenting with T-B-SCID or Omenn syndrome."
      Dalal I. , Tasher D. , Somech R. , Etzioni A. , Garti B.Z. , Lev D. , Cohen S. , Somekh E. , Leshinsky-Silver E.
      Clin. Immunol.140:284-290(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANT OS GLN-454
    16. 16.
      "Clinical characteristics and molecular analysis of three Chinese children with Omenn syndrome."
      Zhang Z.Y. , Zhao X.D. , Jiang L.P. , Liu E.M. , Cui Y.X. , Wang M. , Wei H. , Yu J. , An Y.F. , Yang X.Q.
      Pediatr. Allergy Immunol.22:482-487(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANT OS TRP-699
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