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Index > Protein center > APOBEC3F(Gene name) > Human
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  • APOBEC3F (Gene name),
  • DNA dC->dU-editing enzyme APOBEC-3F (Protein name ),  ABC3F_HUMAN from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • Gene name:
    APOBEC3F;
    Protein name:
    DNA dC->dU-editing enzyme APOBEC-3F;
    Alternative:
    Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3F(A3F);
    Organism:
    Human (Homo sapiens). 
    General Annotation
    Sub Unit:
    Forms heterodimers with APOBEC3G. Binds HIV-1 Vif. In the absence of Vif protein, specifically packaged into HIV-1 virions.
    Function:
    Host cellular restriction factor that may have antiviral activities against exogenous and endogenous viruses, as well as retrotransposons. After being packaged into HIV-1 virions, blocks productive infection by massively editing dC residues to dU on the DNA minus strand during reverse transcription. The editing of the minus strand DNA of HIV-1 during reverse transcription leads to G-to-A transitions in the plus strand. The inhibition of viral replication is either due to the degradation of the minus strand before its integration or to the lethality of the hypermutations. May also play a role in the epigenetic regulation of gene expression through the process of active DNA demethylation.
    Subcellular Location:
    Cytoplasm
    Protein Attributes:
    Sequence length:
    373
    Sequence:
    50:
    MKPHFRNTVE | RMYRDTFSYN | FYNRPILSRR | NTVWLCYEVK | TKGPSRPRLD | 
    100:
    AKIFRGQVYS | QPEHHAEMCF | LSWFCGNQLP | AYKCFQITWF | VSWTPCPDCV | 
    150:
    AKLAEFLAEH | PNVTLTISAA | RLYYYWERDY | RRALCRLSQA | GARVKIMDDE | 
    200:
    EFAYCWENFV | YSEGQPFMPW | YKFDDNYAFL | HRTLKEILRN | PMEAMYPHIF | 
    250:
    YFHFKNLRKA | YGRNESWLCF | TMEVVKHHSP | VSWKRGVFRN | QVDPETHCHA | 
    300:
    ERCFLSWFCD | DILSPNTNYE | VTWYTSWSPC | PECAGEVAEF | LARHSNVNLT | 
    350:
    IFTARLYYFW | DTDYQEGLRS | LSQEGASVEI | MGYKDFKYCW | ENFVYNDDEP | 
    373:
    FKPWKGLKYN | FLFLDSKLQE | ILE
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    SMR:
    UniGene:
    MIM:
    Pfam:
    Pfam:
    String:
    Uniprot:
     
    FOR
    ELISA Kit for Human DNA dC->dU-editing enzyme APOBEC-3F
    CLIA Kit for Human DNA dC->dU-editing enzyme APOBEC-3F
    Polyclonal Antibody for Human DNA dC->dU-editing enzyme APOBEC-3F
    Monoclonal Antibody for Human DNA dC->dU-editing enzyme APOBEC-3F
    Protein for Human DNA dC->dU-editing enzyme APOBEC-3F

    R&D Technical Data
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    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
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    Precision
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    Recovery
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    Linearity
    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
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    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
    For more information, please refer to the manual,Or contact our technical support: tech@eiaab.com.
    References
    1. 1.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3)
    2. 2.
      SeattleSNPs variation discovery resource
      Submitted (2005-07) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1);VARIANTS THR-178; ILE-231 AND CYS-307
    3. 3.
      "The DNA sequence of human chromosome 22."
      Dunham I. , Hunt A.R. , Collins J.E. , Bruskiewich R. , Beare D.M. , Clamp M. , Smink L.J. , Ainscough R. , Almeida J.P. , Babbage A.K. , Bagguley C. , Bailey J. , Barlow K.F. , Bates K.N. , Beasley O.P. , Bird C.P. , Blakey S.E. , Bridgeman A.M. , more...
      Nature402:489-495(1999) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    4. 4.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    5. 5.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2);VARIANTS PRO-48 AND SER-108
      tissue: Pancreas.
      tissue: Spleen.
      tissue: Uterus.
    6. 6.
      "An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22."
      Jarmuz A. , Chester A. , Bayliss J. , Gisbourne J. , Dunham I. , Scott J. , Navaratnam N.
      Genomics79:285-296(2002) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: GENE FAMILY ORGANIZATION;TISSUE SPECIFICITY
    7. 7.
      "Messenger RNA editing in mammals: new members of the APOBEC family seeking roles in the family business."
      Wedekind J.E. , Dance G.S.C. , Sowden M.P. , Smith H.C.
      Trends Genet.19:207-216(2003) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW ON APOBEC FAMILIES
    8. 8.
      "A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins."
      Wiegand H.L. , Doehle B.P. , Bogerd H.P. , Cullen B.R.
      EMBO J.23:2451-2458(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 INFECTIVITY;TISSUE SPECIFICITY
    9. 9.
      "APOBEC3A is a potent inhibitor of adeno-associated virus and retrotransposons."
      Chen H. , Lilley C.E. , Yu Q. , Lee D.V. , Chou J. , Narvaiza I. , Landau N.R. , Weitzman M.D.
      Curr. Biol.16:480-485(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN RETROTRANSPOSITION;SUBCELLULAR LOCATION
    10. 10.
      "Reversed functional organization of mouse and human APOBEC3 cytidine deaminase domains."
      Hakata Y. , Landau N.R.
      J. Biol. Chem.281:36624-36631(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: DOMAIN CMP/DCMP DEAMINASE ZINC-BINDING;MUTAGENESIS OF GLU-67 AND GLU-251
    11. 11.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN SFV RESTRICTION
    12. 12.
      "Human retroviral host restriction factors APOBEC3G and APOBEC3F localize to mRNA processing bodies."
      Wichroski M.J. , Robb G.B. , Rana T.M.
      PLoS Pathog.2:E41-E41(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION;INTERACTION WITH APOBEC3G
    13. 13.
      "The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements."
      Chiu Y.L. , Greene W.C.
      Annu. Rev. Immunol.26:317-353(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW
    14. 14.
      "Hepatitis B: modern concepts in pathogenesis--APOBEC3 cytidine deaminases as effectors in innate immunity against the hepatitis B virus."
      Bonvin M. , Greeve J.
      Curr. Opin. Infect. Dis.21:298-303(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW ON FUNCTION IN HBV RESTRICTION
    15. 15.
      "Restriction of equine infectious anemia virus by equine APOBEC3 cytidine deaminases."
      Zielonka J. , Bravo I.G. , Marino D. , Conrad E. , Perkovic M. , Battenberg M. , Cichutek K. , Muenk C.
      J. Virol.83:7547-7559(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN EIAV RESTRICTION
    16. 16.
      "APOBEC3F and APOBEC3G inhibit HIV-1 DNA integration by different mechanisms."
      Mbisa J.L. , Bu W. , Pathak V.K.
      J. Virol.84:5250-5259(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 RESTRICTION
    17. 17.
      "Inhibition of xenotropic murine leukemia virus-related virus by APOBEC3 proteins and antiviral drugs."
      Paprotka T. , Venkatachari N.J. , Chaipan C. , Burdick R. , Delviks-Frankenberry K.A. , Hu W.S. , Pathak V.K.
      J. Virol.84:5719-5729(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN XMRV RESTRICTION
    18. 18.
      "APOBEC3 proteins mediate the clearance of foreign DNA from human cells."
      Stenglein M.D. , Burns M.B. , Li M. , Lengyel J. , Harris R.S.
      Nat. Struct. Mol. Biol.17:222-229(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN RETROTRANSPOSITION
    19. 19.
      "Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: implications for HIV-1 restriction."
      Refsland E.W. , Stenglein M.D. , Shindo K. , Albin J.S. , Brown W.L. , Harris R.S.
      Nucleic Acids Res.38:4274-4284(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: TISSUE SPECIFICITY
    20. 20.
      "Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain."
      Guo J.U. , Su Y. , Zhong C. , Ming G.L. , Song H.
      Cell145:423-434(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN DNA DEMETHYLATION
    21. 21.
      "Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1."
      Hultquist J.F. , Lengyel J.A. , Refsland E.W. , LaRue R.S. , Lackey L. , Brown W.L. , Harris R.S.
      J. Virol.85:11220-11234(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 RESTRICTION;SUBCELLULAR LOCATION;ENZYME REGULATION
    22. 22.
      "Retroelements versus APOBEC3 family members: No great escape from the magnificent seven."
      Arias J.F. , Koyama T. , Kinomoto M. , Tokunaga K.
      Front. Microbiol.3:275-275(2012) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW
    23. 23.
      "HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodies."
      Phalora P.K. , Sherer N.M. , Wolinsky S.M. , Swanson C.M. , Malim M.H.
      J. Virol.86:11712-11724(2012) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION;SUBCELLULAR LOCATION;INTERACTION WITH AGO1; AGO2 AND AGO3
    24. 24.
      "Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n."
      Refsland E.W. , Hultquist J.F. , Harris R.S.
      PLoS Pathog.8:E1002800-E1002800(2012) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 RESTRICTION
    25. 25.
      "Functions and regulation of the APOBEC family of proteins."
      Smith H.C. , Bennett R.P. , Kizilyer A. , McDougall W.M. , Prohaska K.M.
      Semin. Cell Dev. Biol.23:258-268(2012) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW
    26. 26.
      "APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE in human primary CD4+ t cells and macrophages."
      Chaipan C. , Smith J.L. , Hu W.S. , Pathak V.K.
      J. Virol.87:444-453(2013) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 RESTRICTION
    27. 27.
      "The suppression of HIV-1 infection by APOBEC3 proteins in primary human CD4+ T cells is associated with the inhibition of processive reverse transcription as well as excessive cytidine deamination."
      Gillick K. , Pollpeter D. , Phalora P. , Kim E.Y. , Wolinsky S.M. , Malim M.H.
      J. Virol.87:1508-1517(2013) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 RESTRICTION
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