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Index > Protein center > CTCF(Gene name) > Human
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  • CTCF (Gene name),
  • Transcriptional repressor CTCF (Protein name ),  CTCF_HUMAN from NCBI database.
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  • General Annotation
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  • Gene name:
    CTCF;
    Protein name:
    Transcriptional repressor CTCF;
    Alternative:
    CCCTC-binding factor;11-zinc finger protein;CTCFL paralog;
    Organism:
    Human (Homo sapiens). 
    General Annotation
    Sub Unit:
    Interacts with CHD8.
    Function:
    Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates to the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X- inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.
    Subcellular Location:
    Nucleus nucleoplasm Chromosome Chromosome centromere May translocate to the nucleolus upon cell differentiation. Associates with both centromeres and chromosomal arms during metaphase. Associates with the H19 ICR in mitotic chromosomes. May be preferentially excluded from heterochromatin during interphase.
    Protein Attributes:
    Sequence length:
    727
    Sequence:
    50:
    MEGDAVEAIV | EESETFIKGK | ERKTYQRRRE | GGQEEDACHL | PQNQTDGGEV | 
    100:
    VQDVNSSVQM | VMMEQLDPTL | LQMKTEVMEG | TVAPEAEAAV | DDTQIITLQV | 
    150:
    VNMEEQPINI | GELQLVQVPV | PVTVPVATTS | VEELQGAYEN | EVSKEGLAES | 
    200:
    EPMICHTLPL | PEGFQVVKVG | ANGEVETLEQ | GELPPQEDPS | WQKDPDYQPP | 
    250:
    AKKTKKTKKS | KLRYTEEGKD | VDVSVYDFEE | EQQEGLLSEV | NAEKVVGNMK | 
    300:
    PPKPTKIKKK | GVKKTFQCEL | CSYTCPRRSN | LDRHMKSHTD | ERPHKCHLCG | 
    350:
    RAFRTVTLLR | NHLNTHTGTR | PHKCPDCDMA | FVTSGELVRH | RRYKHTHEKP | 
    400:
    FKCSMCDYAS | VEVSKLKRHI | RSHTGERPFQ | CSLCSYASRD | TYKLKRHMRT | 
    450:
    HSGEKPYECY | ICHARFTQSG | TMKMHILQKH | TENVAKFHCP | HCDTVIARKS | 
    500:
    DLGVHLRKQH | SYIEQGKKCR | YCDAVFHERY | ALIQHQKSHK | NEKRFKCDQC | 
    550:
    DYACRQERHM | IMHKRTHTGE | KPYACSHCDK | TFRQKQLLDM | HFKRYHDPNF | 
    600:
    VPAAFVCSKC | GKTFTRRNTM | ARHADNCAGP | DGVEGENGGE | TKKSKRGRKR | 
    650:
    KMRSKKEDSS | DSENAEPDLD | DNEDEEEPAV | EIEPEPEPQP | VTPAPPPAKK | 
    700:
    RRGRPPGRTN | QPKQNQPTAI | IQVEDQNTGA | IENIIVEVKK | EPDAEPAEGE | 
    727:
    EEEAQPAATD | APNGDLTPEM | ILSMMDR
    3D Structure:
    N/A
    Predicted Eptitope:
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    EIAab Sequence  Vaild Sequence:
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    Related Databases
    MIM:
    UniGene:
    SMR:
    KEGG:
    String:
    Pfam:
    Uniprot:
     
    FOR
    ELISA Kit for Human Transcriptional repressor CTCF
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    E2612m
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    ELISA Kit for Human Transcriptional repressor CTCF
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    E2612h
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    ELISA Kit for Human Transcriptional repressor CTCF
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    ELISA Kit for Human Transcriptional repressor CTCF
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    E2612c
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    96T
    CLIA Kit for Human Transcriptional repressor CTCF
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    U2612h
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    CLIA Kit for Human Transcriptional repressor CTCF
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    U2612r
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    CLIA Kit for Human Transcriptional repressor CTCF
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    U2612c
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    MSDS:
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    CLIA Kit for Human Transcriptional repressor CTCF
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    U2612m
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    Polyclonal Antibody for Human Transcriptional repressor CTCF
    Cat.:
    P2612Rb-m
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    Packing:
    40ug/0.2ml
    Polyclonal Antibody for Human Transcriptional repressor CTCF
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    P2612Rb-r
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    Packing:
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    Polyclonal Antibody for Human Transcriptional repressor CTCF
    Cat.:
    P2612Rb-h
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    Packing:
    40ug/0.2ml
    Polyclonal Antibody for Human Transcriptional repressor CTCF
    Monoclonal Antibody for Human Transcriptional repressor CTCF
    Monoclonal Antibody for Human Transcriptional repressor CTCF
    Monoclonal Antibody for Human Transcriptional repressor CTCF
    Monoclonal Antibody for Human Transcriptional repressor CTCF
    Protein for Human Transcriptional repressor CTCF
    Protein for Human Transcriptional repressor CTCF
    Protein for Human Transcriptional repressor CTCF
    Protein for Human Transcriptional repressor CTCF

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    References
    1. 1.
      "An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes."
      Filippova G.N. , Fagerlie S. , Klenova E.M. , Myers C. , Dehner Y. , Goodwin G. , Neiman P.E. , Collins S.J. , Lobanenkov V.V.
      Mol. Cell. Biol.16:2802-2813(1996) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1);FUNCTION;SUBCELLULAR LOCATION
    2. 2.
      "A widely expressed transcription factor with multiple DNA sequence specificity, CTCF, is localized at chromosome segment 16q22.1 within one of the smallest regions of overlap for common deletions in breast and prostate cancers."
      Filippova G.N. , Lindblom A. , Meincke L.J. , Klenova E.M. , Neiman P.E. , Collins S.J. , Doggett N.A. , Lobanenkov V.V.
      Genes Chromosomes Cancer22:26-36(1998) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA];FUNCTION;TISSUE SPECIFICITY
    3. 3.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA];VARIANTS WILMS TUMOR TRP-339 AND GLN-448;VARIANT BREAST TUMOR GLU-344;VARIANT PROSTATE TUMOR ARG-345
    4. 4.
      "Cloning of human full-length CDSs in BD Creator(TM) system donor vector."
      Kalnine N. , Chen X. , Rolfs A. , Halleck A. , Hines L. , Eisenstein S. , Koundinya M. , Raphael J. , Moreira D. , Kelley T. , LaBaer J. , Lin Y. , Phelan M. , Farmer A.
      Submitted (2003-08) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1)
    5. 5.
      "Homo sapiens protein coding cDNA."
      Totoki Y. , Toyoda A. , Takeda T. , Sakaki Y. , Tanaka A. , Yokoyama S. , Ohara O. , Nagase T. , Kikuno R.F.
      Submitted (2005-03) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2)
      tissue: Brain.
    6. 6.
      "The sequence and analysis of duplication-rich human chromosome 16."
      Martin J. , Han C. , Gordon L.A. , Terry A. , Prabhakar S. , She X. , Xie G. , Hellsten U. , Chan Y.M. , Altherr M. , Couronne O. , Aerts A. , Bajorek E. , Black S. , Blumer H. , Branscomb E. , Brown N.C. , Bruno W.J. , more...
      Nature432:988-994(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    7. 7.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    8. 8.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1)
      tissue: Placenta.
    9. 9.
      "The zinc finger protein CTCF binds to the APBbeta domain of the amyloid beta-protein precursor promoter. Evidence for a role in transcriptional activation."
      Vostrov A.A. , Quitschke W.W.
      J. Biol. Chem.272:33353-33359(1997) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PROTEIN SEQUENCE OF 471-479 AND 483-487;TRANSCRIPTIONAL ACTIVATION OF APP
    10. 10.
      "The novel BORIS + CTCF gene family is uniquely involved in the epigenetics of normal biology and cancer."
      Klenova E.M. , Morse H.C. III , Ohlsson R. , Lobanenkov V.V.
      Semin. Cancer Biol.12:399-414(2002) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: REVIEW
    11. 11.
      "CTCF, a candidate trans-acting factor for X-inactivation choice."
      Chao W. , Huynh K.D. , Spencer R.J. , Davidow L.S. , Lee J.T.
      Science295:345-347(2002) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    12. 12.
      "CTCF binding and higher order chromatin structure of the H19 locus are maintained in mitotic chromatin."
      Burke L.J. , Zhang R. , Bartkuhn M. , Tiwari V.K. , Tavoosidana G. , Kurukuti S. , Weth C. , Leers J. , Galjart N. , Ohlsson R. , Renkawitz R.
      EMBO J.24:3291-3300(2005) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION;ASSOCIATION WITH H19 ICR
    13. 13.
      "Targeting of CTCF to the nucleolus inhibits nucleolar transcription through a poly(ADP-ribosyl)ation-dependent mechanism."
      Torrano V. , Navascues J. , Docquier F. , Zhang R. , Burke L.J. , Chernukhin I. , Farrar D. , Leon J. , Berciano M.T. , Renkawitz R. , Klenova E. , Lafarga M. , Delgado M.D.
      J. Cell Sci.119:1746-1759(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION
    14. 14.
      "CTCF-dependent chromatin insulator is linked to epigenetic remodeling."
      Ishihara K. , Oshimura M. , Nakao M.
      Mol. Cell23:733-742(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH CHD8
    15. 15.
      "CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2."
      Kurukuti S. , Tiwari V.K. , Tavoosidana G. , Pugacheva E. , Murrell A. , Zhao Z. , Lobanenkov V. , Reik W. , Ohlsson R.
      Proc. Natl. Acad. Sci. U.S.A.103:10684-10689(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    16. 16.
      "Critical DNA binding interactions of the insulator protein CTCF: a small number of zinc fingers mediate strong binding, and a single finger-DNA interaction controls binding at imprinted loci."
      Renda M. , Baglivo I. , Burgess-Beusse B. , Esposito S. , Fattorusso R. , Felsenfeld G. , Pedone P.V.
      J. Biol. Chem.282:33336-33345(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    17. 17.
      "DNA methyltransferase 1 and 3B activate BAG-1 expression via recruitment of CTCFL/BORIS and modulation of promoter histone methylation."
      Sun L. , Huang L. , Nguyen P. , Bisht K.S. , Bar-Sela G. , Ho A.S. , Bradbury C.M. , Yu W. , Cui H. , Lee S. , Trepel J.B. , Feinberg A.P. , Gius D.
      Cancer Res.68:2726-2735(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    18. 18.
      "The insulator factor CTCF controls MHC class II gene expression and is required for the formation of long-distance chromatin interactions."
      Majumder P. , Gomez J.A. , Chadwick B.P. , Boss J.M.
      J. Exp. Med.205:785-798(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    19. 19.
      "The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome."
      Fu Y. , Sinha M. , Peterson C.L. , Weng Z.
      PLoS Genet.4:E1000138-E1000138(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    20. 20.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-374; SER-402; SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Cervix carcinoma.
    21. 21.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION;SUBCELLULAR LOCATION
    22. 22.
      "Architectural roles of multiple chromatin insulators at the human apolipoprotein gene cluster."
      Mishiro T. , Ishihara K. , Hino S. , Tsutsumi S. , Aburatani H. , Shirahige K. , Kinoshita Y. , Nakao M.
      EMBO J.28:1234-1245(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION
    23. 23.
      "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
      Mayya V. , Lundgren D.H. , Hwang S.-I. , Rezaul K. , Wu L. , Eng J.K. , Rodionov V. , Han D.K.
      Sci. Signal.2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Leukemic T-cell.
    24. 24.
      "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
      Choudhary C. , Kumar C. , Gnad F. , Nielsen M.L. , Rehman M. , Walther T.C. , Olsen J.V. , Mann M.
      Science325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    25. 25.
      "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V. , Vermeulen M. , Santamaria A. , Kumar C. , Miller M.L. , Jensen L.J. , Gnad F. , Cox J. , Jensen T.S. , Nigg E.A. , Brunak S. , Mann M.
      Sci. Signal.3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-289; THR-317; SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Cervix carcinoma.
    26. 26.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    27. 27.
      "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
      Rigbolt K.T. , Prokhorova T.A. , Akimov V. , Henningsen J. , Johansen P.T. , Kratchmarova I. , Kassem M. , Mann M. , Olsen J.V. , Blagoev B.
      Sci. Signal.4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-609; SER-610 AND SER-612;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    28. 28.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    29. 29.
      "Solution structure of zinc finger domains of transcriptional repressor CTCF protein."
      RIKEN structural genomics initiative (RSGI)
      Submitted (2005-11) to the PDB data bank
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 399-589
    30. 30.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: VARIANT MRD21 TRP-567
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