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Index > Protein center > Ddx1(Gene name) > Rat
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  • Ddx1 (Gene name),
  • ATP-dependent RNA helicase DDX1 (Protein name ),  DDX1_RAT from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • 3D
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  • Predicted Eptitope
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  • Vaild Sequence
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  • Gene name:
    Ddx1;
    Protein name:
    ATP-dependent RNA helicase DDX1;
    Alternative:
    DEAD box protein 1;
    Organism:
    Rat (Rattus norvegicus). 
    General Annotation
    Sub Unit:
    Interacts with PHF5A (via C-terminus). Interacts with MBNL1. Interacts with CSTF2. Interacts with HNRNPK. Interacts with ATM. Interacts with RELA (via C-terminal). Component of the tRNA-splicing ligase complex.
    Function:
    Acts as an ATP-dependent RNA helicase, able to unwind both RNA-RNA and RNA-DNA duplexes. Possesses 5' single-stranded RNA overhang nuclease activity. Possesses ATPase activity on various RNA, but not DNA polynucleotides. May play a role in RNA clearance at DNA double-strand breaks (DSBs), thereby facilitating the template-guided repair of transcriptionally active regions of the genome. Together with RELA, acts as a coactivator to enhance NF-kappa-B-mediated transcriptional activation. Acts as a positive transcriptional regulator of cyclin CCND2 expression. Binds to the cyclin CCND2 promoter region. Associates with chromatin at the NF-kappa-B promoter region via association with RELA. Binds to poly(A) RNA. May be involved in 3'-end cleavage and polyadenylation of pre-mRNAs.
    Subcellular Location:
    Nucleus Cytoplasm Cytoplasmic granule Localized with MBNL1, TIAL1 and YBX1 in stress granules upon stress. Localized with CSTF2 in cleavage bodies. Forms large aggregates called DDX1 bodies. Relocalized into multiple foci (IR-induced foci or IRIF) after IR treatment, a process that depends on the presence of chromosomal DNA and/or RNA-DNA duplexes. Relocalized at sites of DNA double-strand breaks (DSBs) in an ATM-dependent manner after IR treatment. Colocalized with RELA in the nucleus upon TNF-alpha induction.
    Protein Attributes:
    Sequence length:
    740
    Sequence:
    50:
    MAAFSEMGVM | PEIAQAVEEM | DWLLPTDIQA | ESIPLILGGG | DVLMAAETGS | 
    100:
    GKTGAFSIPV | IQIVYETLKD | QQEGKKGKAT | IKTGASVLNK | WQMNPYDRGS | 
    150:
    AFAIGSDGLC | CQSREVKEWH | GCRATRGLLR | GKHYYEVSCH | DQGLCRVGWS | 
    200:
    TMQASLDLGT | DKFGFGFGGT | GKKSHNKQFD | NYGEEFTMHD | TIGCYLDIDK | 
    250:
    GHVKFSKNGK | DLGLAFEIPA | HIKNQALFPA | CVLKNAELKF | NFGEEEFKFP | 
    300:
    PKDGFVALSK | APDSYVVKSQ | HTGNAQVSQT | KFLPNAPKAL | IVEPSRELAE | 
    350:
    QTLNNVKQFK | KYIDNPKLRE | LLIIGGVAAR | DQLSVLDNGV | DIVVGTPGRL | 
    400:
    DDLVSTGKLN | LSQVRFLVLD | EADGLLSQGY | SDFINRMHNQ | IPQITSDGKR | 
    450:
    LQVIVCSATL | HSFDVKKLSE | KIMHFPTWVD | LKGEDSVPDT | VHHVVVPVNP | 
    500:
    KTDRLWERLG | KNHIRTDDVH | AKDNTRPGAN | SPEMWSEAIK | ILKGEYAVRA | 
    550:
    IKEHKMDQAI | IFCRTKIDCD | NLEQYFMQQG | GGPDKKGHQF | SCVCLHGDRK | 
    600:
    PHERKQNLER | FKKGDVRFLI | CTDVAARGID | IHGVPYVINV | TLPDEKQNYV | 
    650:
    HRIGRVGRAE | RMGLAISLVA | TEKEKVWYHV | CSNRGKGCYN | TRLKEDGGCT | 
    700:
    IWYNEMQLLS | EIEEHLNCTI | SQVEPDIKVP | VDEFDGKVTY | GQKRAAGGGN | 
    740:
    YKGHVDILAP | TVQELAALEK | EAQTSFLHLG | YLPNQLFRTF | 
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    UniGene:
    Pfam:
    KEGG:
    String:
    Uniprot:
     
    FOR
    ELISA Kit for Rat ATP-dependent RNA helicase DDX1
    ELISA Kit for Rat ATP-dependent RNA helicase DDX1
    ELISA Kit for Rat ATP-dependent RNA helicase DDX1
    ELISA Kit for Rat ATP-dependent RNA helicase DDX1
    ELISA Kit for Rat ATP-dependent RNA helicase DDX1
    CLIA Kit for Rat ATP-dependent RNA helicase DDX1
    CLIA Kit for Rat ATP-dependent RNA helicase DDX1
    CLIA Kit for Rat ATP-dependent RNA helicase DDX1
    CLIA Kit for Rat ATP-dependent RNA helicase DDX1
    CLIA Kit for Rat ATP-dependent RNA helicase DDX1
    Polyclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Polyclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Polyclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Polyclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Polyclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Monoclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Monoclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Monoclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Monoclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Monoclonal Antibody for Rat ATP-dependent RNA helicase DDX1
    Protein for Rat ATP-dependent RNA helicase DDX1
    Protein for Rat ATP-dependent RNA helicase DDX1
    Protein for Rat ATP-dependent RNA helicase DDX1
    Protein for Rat ATP-dependent RNA helicase DDX1
    Protein for Rat ATP-dependent RNA helicase DDX1

    R&D Technical Data
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    Precision
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    Recovery
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    Linearity
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    References
    1. 1.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      tissue: Testis.
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