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Index > Protein center > Ddx42(Gene name) > Mouse
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  • Ddx42 (Gene name),
  • ATP-dependent RNA helicase DDX42 (Protein name ),  DDX42_MOUSE from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • Predicted Eptitope
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  • Vaild Sequence
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  • Gene name:
    Ddx42;
    Protein name:
    ATP-dependent RNA helicase DDX42;
    Alternative:
    DEAD box protein 42;
    Organism:
    Mouse (Mus musculus). 
    General Annotation
    Sub Unit:
    Component of splicing factor SF3B which is composed of at least eight subunits; SF3B1/SAP155/SF3B155, SF3B2/SAP145/SF3B155, SF3B3/SAP130/SF3B130, SF3B4/SAP49/SF3B49, SF3B14A, PHF5A/SF3B14B, SF3B10 and SF3B125. Interacts (via the C-terminus) with TP53BP2; the interaction is not inhibitied by TP53BP2 ubiquitination and is independent of p53/TP53.
    Function:
    ATP-dependent RNA helicase. Binds to partially double-stranded RNAs (dsRNAs) in order to unwind RNA secondary structures. Unwinding is promoted in the presence of single-strand binding proteins. Mediates also RNA duplex formation thereby displacing the single-strand RNA binding protein. ATP and ADP modulate its activity: ATP binding and hydrolysis by DDX42 triggers RNA strand separation, whereas the ADP-bound form of the protein triggers annealing of complementary RNA strands. Involved in the survival of cells by interacting with TP53BP2 and thereby counteracting the apoptosis-stimulating activity of TP53BP2. Relocalizes TP53BP2 to the cytoplasm.
    Subcellular Location:
    Cytoplasm Nucleus speckle Nucleus Cajal body
    Protein Attributes:
    Sequence length:
    929
    Sequence:
    50:
    MNWNKGGPGT | KRGFGFGGFA | ISAGKKEEAK | LPQQSHSAFG | AASSSSGFGK | 
    100:
    SAPPQLPSFY | KIGSKRANFD | EENAYFEDEE | EDSSNVDLPY | IPAENSPTRQ | 
    150:
    QFHSKPADSD | SDDDPLEAFM | AEVEDQAARD | MKRLEEKDKE | RKNVKGIRDD | 
    200:
    IEEEDDQEAY | FRYMAENPTA | GVVQEEEEDN | LEYDSDGNPI | APSKKIIDPL | 
    250:
    PPIDHSEIDY | PPFEKNFYNE | HEEITNLTPQ | QLIDLRHKLN | LRVSGAAPPR | 
    300:
    PGSSFAHFGF | DEQLMHQIRK | SEYTQPTPIQ | CQGVPVALSG | RDMIGIAKTG | 
    350:
    SGKTAAFIWP | MLIHIMDQKE | LEPGDGPIAV | IVCPTRELCQ | QIHAECKRFG | 
    400:
    KAYNLRSVAV | YGGGSMWEQA | KALQEGAEIV | VCTPGRLIDH | VKKKATNLQR | 
    450:
    VSYLVFDEAD | RMFDMGFEYQ | VRSIASHVRP | DRQTLLFSAT | FRKKIEKLAR | 
    500:
    DILIDPIRVV | QGDIGEANED | VTQIVEILHS | GPSKWNWLTR | RLVEFTSSGS | 
    550:
    VLLFVTKKAN | AEELASNLKQ | EGHNLGLLHG | DMDQSERNKV | ISDFKKKDIP | 
    600:
    VLVATDVAAR | GLDIPSIKTV | INYDVARDID | THTHRIGRTG | RAGEKGVAYT | 
    650:
    LLTPKDSNFA | GDLVRNLEGA | NQHVSKELLD | LAMQNAWFRK | SRFKGGKGKK | 
    700:
    LNIGGGGLGY | RERPGLGSEN | SDRGNNNNVM | SNYEAYKPST | GAMGDRLTAM | 
    750:
    KAAFQSQYKS | HFVAASLSNQ | KAGTSSAGAS | GWTSAGSLNS | VPTNSAQQGH | 
    800:
    NSPDNPMTSS | TKNIPGFNNS | GNISSAPVTY | PSIGAQGVNN | TASGNNSREG | 
    850:
    IGGGNGKRER | YTENRGGSRH | SHGDGGNRHG | DGGRHGDGYR | YPESGSRHTD | 
    900:
    GHRHGETRHG | GSAGRHGESR | GANDGRNGES | RKEGFNRENK | MDPKVDSSRM | 
    929:
    DKVDSKTDKT | PDGFAVPEPP | KRKKSRWDS
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    KEGG:
    Pfam:
    SMR:
    UniGene:
    String:
    Uniprot:
     
    FOR
    ELISA Kit for Mouse ATP-dependent RNA helicase DDX42
    Cat.:
    E14799h
    Price:
    Please sign in first.
    MSDS:
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    Packing:
    96T
    Range:
    Please sign in first.
    ELISA Kit for Mouse ATP-dependent RNA helicase DDX42
    MSDS:
    Please sign in first.
    ELISA Kit for Mouse ATP-dependent RNA helicase DDX42
    Cat.:
    E14799m
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    CLIA Kit for Mouse ATP-dependent RNA helicase DDX42
    MSDS:
    Please sign in first.
    CLIA Kit for Mouse ATP-dependent RNA helicase DDX42
    Cat.:
    U14799h
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    CLIA Kit for Mouse ATP-dependent RNA helicase DDX42
    Cat.:
    U14799m
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    Polyclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Polyclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Polyclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Monoclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Monoclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Monoclonal Antibody for Mouse ATP-dependent RNA helicase DDX42
    Protein for Mouse ATP-dependent RNA helicase DDX42
    Protein for Mouse ATP-dependent RNA helicase DDX42
    Protein for Mouse ATP-dependent RNA helicase DDX42

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    Precision
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    References
    1. 1.
      "The transcriptional landscape of the mammalian genome."
      Carninci P. , Kasukawa T. , Katayama S. , Gough J. , Frith M.C. , Maeda N. , Oyama R. , Ravasi T. , Lenhard B. , Wells C. , Kodzius R. , Shimokawa K. , Bajic V.B. , Brenner S.E. , Batalov S. , Forrest A.R. , Zavolan M. , Davis M.J. , more...
      Science309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2)
      strain: C57BL/6J.
      strain: NOD.
      tissue: Embryonic stem cell.
      tissue: Pancreas.
      tissue: Spleen.
      tissue: Thymus.
    2. 2.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
      strain: C57BL/6J.
    3. 3.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1)
      strain: C57BL/6.
      tissue: Brain.
    4. 4.
      Lubec G. , Sunyer B. , Chen W.-Q.
      Submitted (2009-01) to the UniProtKB
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PROTEIN SEQUENCE OF 616-626;IDENTIFICATION BY MASS SPECTROMETRY
      strain: OF1.
      tissue: Hippocampus.
    5. 5.
      "Phosphoproteomic analysis of the developing mouse brain."
      Ballif B.A. , Villen J. , Beausoleil S.A. , Schwartz D. , Gygi S.P.
      Mol. Cell. Proteomics3:1093-1101(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Embryonic brain.
    6. 6.
      "A differential phosphoproteomic analysis of retinoic acid-treated P19 cells."
      Smith J.C. , Duchesne M.A. , Tozzi P. , Ethier M. , Figeys D.
      J. Proteome Res.6:3174-3186(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-104;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Teratocarcinoma.
    7. 7.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-109;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Liver.
    8. 8.
      "The phagosomal proteome in interferon-gamma-activated macrophages."
      Trost M. , English L. , Lemieux S. , Courcelles M. , Desjardins M. , Thibault P.
      Immunity30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-104 AND SER-109;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    9. 9.
      "Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry."
      Sweet S.M. , Bailey C.M. , Cunningham D.L. , Heath J.K. , Cooper H.J.
      Mol. Cell. Proteomics8:904-912(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Embryonic fibroblast.
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