"Interaction of the Unc-51-like kinase and microtubule-associated protein light chain 3 related proteins in the brain: possible role of vesicular transport in axonal elongation."
Okazaki N. , Yan J. , Yuasa S. , Ueno T. , Kominami E. , Masuho Y. , Koga H. , Muramatsu M.-A.
Brain Res. Mol. Brain Res.85:1-12(2000) [PubMed] [Europe PMC] [Abstract]

"Cloning, expression patterns, and chromosome localization of three human and two mouse homologues of GABA(A) receptor-associated protein."
Xin Y. , Yu L. , Chen Z. , Zheng L. , Fu Q. , Jiang J. , Zhang P. , Gong R. , Zhao S.
Genomics74:408-413(2001) [PubMed] [Europe PMC] [Abstract]

Storch S. , Braulke T.
Submitted (1998-08) to the EMBL/GenBank/DDBJ databases

"Human GEF2 homolog gene."
Song H. , Peng Y. , Yu Y. , Fu G. , Mao M. , Zhang Q. , Zhu H. , Li G. , Luo M. , Chen J. , Hu R.
Submitted (1998-07) to the EMBL/GenBank/DDBJ databases

"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)."
Halleck A. , Ebert L. , Mkoundinya M. , Schick M. , Eisenstein S. , Neubert P. , Kstrang K. , Schatten R. , Shen B. , Henze S. , Mar W. , Korn B. , Zuo D. , Hu Y. , LaBaer J.
Submitted (2004-06) to the EMBL/GenBank/DDBJ databases

"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T. , Suzuki Y. , Nishikawa T. , Otsuki T. , Sugiyama T. , Irie R. , Wakamatsu A. , Hayashi K. , Sato H. , Nagai K. , Kimura K. , Makita H. , Sekine M. , Obayashi M. , Nishi T. , Shibahara T. , Tanaka T. , Ishii S. , Yamamoto J. , Saito K. , Kawai Y. , Isono Y. , Nakamura Y. , Nagahari K. , Murakami K. , Yasuda T. , Iwayanagi T. , Wagatsuma M. , Shiratori A. , Sudo H. , Hosoiri T. , Kaku Y. , Kodaira H. , Kondo H. , Sugawara M. , Takahashi M. , Kanda K. , Yokoi T. , Furuya T. , Kikkawa E. , Omura Y. , Abe K. , Kamihara K. , Katsuta N. , Sato K. , Tanikawa M. , Yamazaki M. , Ninomiya K. , Ishibashi T. , Yamashita H. , Murakawa K. , Fujimori K. , Tanai H. , Kimata M. , Watanabe M. , Hiraoka S. , Chiba Y. , Ishida S. , Ono Y. , Takiguchi S. , Watanabe S. , Yosida M. , Hotuta T. , Kusano J. , Kanehori K. , Takahashi-Fujii A. , Hara H. , Tanase T.-O. , Nomura Y. , Togiya S. , Komai F. , Hara R. , Takeuchi K. , Arita M. , Imose N. , Musashino K. , Yuuki H. , Oshima A. , Sasaki N. , Aotsuka S. , Yoshikawa Y. , Matsunawa H. , Ichihara T. , Shiohata N. , Sano S. , Moriya S. , Momiyama H. , Satoh N. , Takami S. , Terashima Y. , Suzuki O. , Nakagawa S. , Senoh A. , Mizoguchi H. , Goto Y. , Shimizu F. , Wakebe H. , Hishigaki H. , Watanabe T. , Sugiyama A. , Takemoto M. , Kawakami B. , Yamazaki M. , Watanabe K. , Kumagai A. , Itakura S. , Fukuzumi Y. , Fujimori Y. , Komiyama M. , Tashiro H. , Tanigami A. , Fujiwara T. , Ono T. , Yamada K. , Fujii Y. , Ozaki K. , Hirao M. , Ohmori Y. , Kawabata A. , Hikiji T. , Kobatake N. , Inagaki H. , Ikema Y. , Okamoto S. , Okitani R. , Kawakami T. , Noguchi S. , Itoh T. , Shigeta K. , Senba T. , Matsumura K. , Nakajima Y. , Mizuno T. , Morinaga M. , Sasaki M. , Togashi T. , Oyama M. , Hata H. , Watanabe M. , Komatsu T. , Mizushima-Sugano J. , Satoh T. , Shirai Y. , Takahashi Y. , Nakagawa K. , Okumura K. , Nagase T. , Nomura N. , Kikuchi H. , Masuho Y. , Yamashita R. , Nakai K. , Yada T. , Nakamura Y. , Ohara O. , Isogai T. , Sugano S. more...
Nat. Genet.36:40-45(2004) [PubMed] [Europe PMC] [Abstract]

Mural R.J. , Istrail S. , Sutton G.G. , Florea L. , Halpern A.L. , Mobarry C.M. , Lippert R. , Walenz B. , Shatkay H. , Dew I. , Miller J.R. , Flanigan M.J. , Edwards N.J. , Bolanos R. , Fasulo D. , Halldorsson B.V. , Hannenhalli S. , Turner R. , Yooseph S. , Lu F. , Nusskern D.R. , Shue B.C. , Zheng X.H. , Zhong F. , Delcher A.L. , Huson D.H. , Kravitz S.A. , Mouchard L. , Reinert K. , Remington K.A. , Clark A.G. , Waterman M.S. , Eichler E.E. , Adams M.D. , Hunkapiller M.W. , Myers E.W. , Venter J.C. more...
Submitted (2005-09) to the EMBL/GenBank/DDBJ databases

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]

"The human homolog of Saccharomyces cerevisiae Apg7p is a Protein-activating enzyme for multiple substrates including human Apg12p, GATE-16, GABARAP, and MAP-LC3."
Tanida I. , Tanida-Miyake E. , Ueno T. , Kominami E.
J. Biol. Chem.276:1701-1706(2001) [PubMed] [Europe PMC] [Abstract]

"Human Apg3p/Aut1p homologue is an authentic E2 enzyme for multiple substrates, GATE-16, GABARAP, and MAP-LC3, and facilitates the conjugation of hApg12p to hApg5p."
Tanida I. , Tanida-Miyake E. , Komatsu M. , Ueno T. , Kominami E.
J. Biol. Chem.277:13739-13744(2002) [PubMed] [Europe PMC] [Abstract]

"GATE-16 and GABARAP are authentic modifiers mediated by Apg7 and Apg3."
Tanida I. , Komatsu M. , Ueno T. , Kominami E.
Biochem. Biophys. Res. Commun.300:637-644(2003) [PubMed] [Europe PMC] [Abstract]

"LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation."
Kabeya Y. , Mizushima N. , Yamamoto A. , Oshitani-Okamoto S. , Ohsumi Y. , Yoshimori T.
J. Cell Sci.117:2805-2812(2004) [PubMed] [Europe PMC] [Abstract]

"p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy."
Pankiv S. , Clausen T.H. , Lamark T. , Brech A. , Bruun J.A. , Outzen H. , Overvatn A. , Bjorkoy G. , Johansen T.
J. Biol. Chem.282:24131-24145(2007) [PubMed] [Europe PMC] [Abstract]

"ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage."
Matsuoka S. , Ballif B.A. , Smogorzewska A. , McDonald E.R. III , Hurov K.E. , Luo J. , Bakalarski C.E. , Zhao Z. , Solimini N. , Lerenthal Y. , Shiloh Y. , Gygi S.P. , Elledge S.J.
Science316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract]

"The TP53INP2 protein is required for autophagy in mammalian cells."
Nowak J. , Archange C. , Tardivel-Lacombe J. , Pontarotti P. , Pebusque M.J. , Vaccaro M.I. , Velasco G. , Dagorn J.C. , Iovanna J.L.
Mol. Biol. Cell20:870-881(2009) [PubMed] [Europe PMC] [Abstract]

"Lysine acetylation targets protein complexes and co-regulates major cellular functions."
Choudhary C. , Kumar C. , Gnad F. , Nielsen M.L. , Rehman M. , Walther T.C. , Olsen J.V. , Mann M.
Science325:834-840(2009) [PubMed] [Europe PMC] [Abstract]

"LC3 and GATE-16/GABARAP subfamilies are both essential yet act differently in autophagosome biogenesis."
Weidberg H. , Shvets E. , Shpilka T. , Shimron F. , Shinder V. , Elazar Z.
EMBO J.29:1792-1802(2010) [PubMed] [Europe PMC] [Abstract]

"Network organization of the human autophagy system."
Behrends C. , Sowa M.E. , Gygi S.P. , Harper J.W.
Nature466:68-76(2010) [PubMed] [Europe PMC] [Abstract]

"Initial characterization of the human central proteome."
Burkard T.R. , Planyavsky M. , Kaupe I. , Breitwieser F.P. , Buerckstuemmer T. , Bennett K.L. , Superti-Furga G. , Colinge J.
BMC Syst. Biol.5:17-17(2011) [PubMed] [Europe PMC] [Abstract]

"OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal maturation."
Itoh T. , Kanno E. , Uemura T. , Waguri S. , Fukuda M.
J. Cell Biol.192:839-853(2011) [PubMed] [Europe PMC] [Abstract]

"Autophagy promotes primary ciliogenesis by removing OFD1 from centriolar satellites."
Tang Z. , Lin M.G. , Stowe T.R. , Chen S. , Zhu M. , Stearns T. , Franco B. , Zhong Q.
Nature502:254-257(2013) [PubMed] [Europe PMC] [Abstract]

"TP53INP1, a tumor suppressor, interacts with LC3 and ATG8-family proteins through the LC3-interacting region (LIR) and promotes autophagy-dependent cell death."
Seillier M. , Peuget S. , Gayet O. , Gauthier C. , N'guessan P. , Monte M. , Carrier A. , Iovanna J.L. , Dusetti N.J.
Cell Death Differ.19:1525-1535(2012) [PubMed] [Europe PMC] [Abstract]

"ATG8 family proteins act as scaffolds for assembly of the ULK complex: sequence requirements for LC3-interacting region (LIR) motifs."
Alemu E.A. , Lamark T. , Torgersen K.M. , Birgisdottir A.B. , Larsen K.B. , Jain A. , Olsvik H. , Overvatn A. , Kirkin V. , Johansen T.
J. Biol. Chem.287:39275-39290(2012) [PubMed] [Europe PMC] [Abstract]

"Rab GTPase-activating proteins in autophagy: regulation of endocytic and autophagy pathways by direct binding to human ATG8 modifiers."
Popovic D. , Akutsu M. , Novak I. , Harper J.W. , Behrends C. , Dikic I.
Mol. Cell. Biol.32:1733-1744(2012) [PubMed] [Europe PMC] [Abstract]

"Identification of autophagosome-associated proteins and regulators by quantitative proteomic analysis and genetic screens."
Dengjel J. , Hoyer-Hansen M. , Nielsen M.O. , Eisenberg T. , Harder L.M. , Schandorff S. , Farkas T. , Kirkegaard T. , Becker A.C. , Schroeder S. , Vanselow K. , Lundberg E. , Nielsen M.M. , Kristensen A.R. , Akimov V. , Bunkenborg J. , Madeo F. , Jaattela M. , Andersen J.S. more...
Mol. Cell. Proteomics11:M111.014035.1-M111.014035.17(2012) [PubMed] [Europe PMC] [Abstract]

"DOR/Tp53inp2 and Tp53inp1 constitute a metazoan gene family encoding dual regulators of autophagy and transcription."
Sancho A. , Duran J. , Garcia-Espana A. , Mauvezin C. , Alemu E.A. , Lamark T. , Macias M.J. , Desalle R. , Royo M. , Sala D. , Chicote J.U. , Palacin M. , Johansen T. , Zorzano A.
PLoS ONE7:E34034-E34034(2012) [PubMed] [Europe PMC] [Abstract]

"Modulation of serines 17 and 24 in the LC3-interacting region of Bnip3 determines pro-survival mitophagy versus apoptosis."
Zhu Y. , Massen S. , Terenzio M. , Lang V. , Chen-Lindner S. , Eils R. , Novak I. , Dikic I. , Hamacher-Brady A. , Brady N.R.
J. Biol. Chem.288:1099-1113(2013) [PubMed] [Europe PMC] [Abstract]