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Index > Protein center > VPS4B(Gene name) > Human
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  • VPS4B (Gene name),
  • Vacuolar protein sorting-associated protein 4B (Protein name ),  VPS4B_HUMAN from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • Predicted Eptitope
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  • Vaild Sequence
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  • Gene name:
    VPS4B(MIG1;SKD1;VPS42);
    Protein name:
    Vacuolar protein sorting-associated protein 4B;
    Alternative:
    Suppressor of K(+) transport growth defect 1(Protein SKD1);Cell migration-inducing gene 1 protein;
    Organism:
    Human (Homo sapiens). 
    General Annotation
    Sub Unit:
    Proposed to be monomeric or homodimeric in nucleotide-free form and to oligomerize upon binding to ATP to form two stacked hexameric or heptameric rings with a central pore through which ESCRT-III substrates are translocated in an ATP-dependent manner. In vitro, associates on the inside of a helical tubular structure formed by a CHMP2A-CHMP3 polymer. Interacts with CHMP1A, CHMP1B, CHMP2A, CHMP4B and CHMP6. Interacts with VPS4A; the interaction suggests a heteromeric assembly with VPS4A. Interacts with VTA1.
    Function:
    Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. In conjunction with the ESCRT machinery also appears to function in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses).
    Subcellular Location:
    Prevacuolar compartment membrane Peripheral membrane protein Late endosome membrane Peripheral membrane protein Membrane-associated in the prevacuolar endosomal compartment. Localized in HIV-1 particles purified from acutely infected cells.
    Protein Attributes:
    Sequence length:
    444
    Sequence:
    50:
    MSSTSPNLQK | AIDLASKAAQ | EDKAGNYEEA | LQLYQHAVQY | FLHVVKYEAQ | 
    100:
    GDKAKQSIRA | KCTEYLDRAE | KLKEYLKNKE | KKAQKPVKEG | QPSPADEKGN | 
    150:
    DSDGEGESDD | PEKKKLQNQL | QGAIVIERPN | VKWSDVAGLE | GAKEALKEAV | 
    200:
    ILPIKFPHLF | TGKRTPWRGI | LLFGPPGTGK | SYLAKAVATE | ANNSTFFSIS | 
    250:
    SSDLVSKWLG | ESEKLVKNLF | QLARENKPSI | IFIDEIDSLC | GSRSENESEA | 
    300:
    ARRIKTEFLV | QMQGVGVDND | GILVLGATNI | PWVLDSAIRR | RFEKRIYIPL | 
    350:
    PEPHARAAMF | KLHLGTTQNS | LTEADFRELG | RKTDGYSGAD | ISIIVRDALM | 
    400:
    QPVRKVQSAT | HFKKVRGPSR | ADPNHLVDDL | LTPCSPGDPG | AIEMTWMDVP | 
    444:
    GDKLLEPVVS | MSDMLRSLSN | TKPTVNEHDL | LKLKKFTEDF | GQEG
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    Pfam:
    SMR:
    UniGene:
    KEGG:
    MIM:
    String:
    Uniprot:
     
    FOR
    ELISA Kit for Human Vacuolar protein sorting-associated protein 4B
    ELISA Kit for Human Vacuolar protein sorting-associated protein 4B
    ELISA Kit for Human Vacuolar protein sorting-associated protein 4B
    CLIA Kit for Human Vacuolar protein sorting-associated protein 4B
    CLIA Kit for Human Vacuolar protein sorting-associated protein 4B
    CLIA Kit for Human Vacuolar protein sorting-associated protein 4B
    Polyclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Polyclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Polyclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Monoclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Monoclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Monoclonal Antibody for Human Vacuolar protein sorting-associated protein 4B
    Protein for Human Vacuolar protein sorting-associated protein 4B
    Protein for Human Vacuolar protein sorting-associated protein 4B
    Protein for Human Vacuolar protein sorting-associated protein 4B

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    References
    1. 1.
      "Mammalian cells express two VPS4 proteins both of which are involved in intracellular protein trafficking."
      Scheuring S. , Roehricht R.A. , Schoening-Burkhardt B. , Beyer A. , Mueller S. , Abts H.F. , Koehrer K.
      J. Mol. Biol.312:469-480(2001) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA];FUNCTION;INTERACTION WITH VPS4A;SUBCELLULAR LOCATION;TISSUE SPECIFICITY;MUTAGENESIS OF GLU-235
    2. 2.
      "Comparative sequence and expression analyses of four mammalian VPS4 genes."
      Beyer A. , Scheuring S. , Mueller S. , Mincheva A. , Lichter P. , Koehrer K.
      Gene305:47-59(2003) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]
      tissue: Skin.
    3. 3.
      "Identification of genes expressed in human CD34(+) hematopoietic stem/progenitor cells by expressed sequence tags and efficient full-length cDNA cloning."
      Mao M. , Fu G. , Wu J.-S. , Zhang Q.-H. , Zhou J. , Kan L.-X. , Huang Q.-H. , He K.-L. , Gu B.-W. , Han Z.-G. , Shen Y. , Gu J. , Yu Y.-P. , Xu S.-H. , Wang Y.-X. , Chen S.-J. , Chen Z.
      Proc. Natl. Acad. Sci. U.S.A.95:8175-8180(1998) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      tissue: Umbilical cord blood.
    4. 4.
      "Identification of a human cell migration gene 1."
      Kim J.W.
      Submitted (2003-02) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
    5. 5.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    6. 6.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      tissue: Testis.
    7. 7.
      "CHMP1 functions as a member of a newly defined family of vesicle trafficking proteins."
      Howard T.L. , Stauffer D.R. , Degnin C.R. , Hollenberg S.M.
      J. Cell Sci.114:2395-2404(2001) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH CHMP2A
    8. 8.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION IN HIV-1 BUDDING;INTERACTION WITH CHMP1A; CHMP1B CHMP2A; CHMP4B AND CHMP6;SUBCELLULAR LOCATION
    9. 9.
      "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks."
      Olsen J.V. , Blagoev B. , Gnad F. , Macek B. , Kumar C. , Mortensen P. , Mann M.
      Cell127:635-648(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Cervix carcinoma.
    10. 10.
      "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage."
      Matsuoka S. , Ballif B.A. , Smogorzewska A. , McDonald E.R. III , Hurov K.E. , Luo J. , Bakalarski C.E. , Zhao Z. , Solimini N. , Lerenthal Y. , Shiloh Y. , Gygi S.P. , Elledge S.J.
      Science316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Embryonic kidney.
    11. 11.
      "Two distinct modes of ESCRT-III recognition are required for VPS4 functions in lysosomal protein targeting and HIV-1 budding."
      Kieffer C. , Skalicky J.J. , Morita E. , De Domenico I. , Ward D.M. , Kaplan J. , Sundquist W.I.
      Dev. Cell15:62-73(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: MUTAGENESIS OF ALA-15 AND LEU-66
    12. 12.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Platelet.
    13. 13.
      "Novel interactions of ESCRT-III with LIP5 and VPS4 and their implications for ESCRT-III disassembly."
      Shim S. , Merrill S.A. , Hanson P.I.
      Mol. Biol. Cell19:2661-2672(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH VTA1;MUTAGENESIS OF 390-GLY--TRP-396
    14. 14.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Cervix carcinoma.
    15. 15.
      "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography."
      Han G. , Ye M. , Zhou H. , Jiang X. , Feng S. , Jiang X. , Tian R. , Wan D. , Zou H. , Gu J.
      Proteomics8:1346-1361(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Liver.
    16. 16.
      "Helical structures of ESCRT-III are disassembled by VPS4."
      Lata S. , Schoehn G. , Jain A. , Pires R. , Piehler J. , Goettlinger H.G. , Weissenhorn W.
      Science321:1354-1357(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION;ASSOCIATION WITH THE CHMP2A-CHMP3 POLYMER;ELECTRON MICROSCOPY
    17. 17.
      "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
      Gauci S. , Helbig A.O. , Slijper M. , Krijgsveld J. , Heck A.J. , Mohammed S.
      Anal. Chem.81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    18. 18.
      "Biochemical analyses of human IST1 and its function in cytokinesis."
      Bajorek M. , Morita E. , Skalicky J.J. , Morham S.G. , Babst M. , Sundquist W.I.
      Mol. Biol. Cell20:1360-1373(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH IST1
    19. 19.
      "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
      Choudhary C. , Kumar C. , Gnad F. , Nielsen M.L. , Rehman M. , Walther T.C. , Olsen J.V. , Mann M.
      Science325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    20. 20.
      "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
      Olsen J.V. , Vermeulen M. , Santamaria A. , Kumar C. , Miller M.L. , Jensen L.J. , Gnad F. , Cox J. , Jensen T.S. , Nigg E.A. , Brunak S. , Mann M.
      Sci. Signal.3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-93; SER-102 AND SER-108;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
      tissue: Cervix carcinoma.
    21. 21.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    22. 22.
      "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
      Rigbolt K.T. , Prokhorova T.A. , Akimov V. , Henningsen J. , Johansen P.T. , Kratchmarova I. , Kassem M. , Mann M. , Olsen J.V. , Blagoev B.
      Sci. Signal.4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-102;IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
    23. 23.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 1-77;DOMAIN;VARIANT MET-58
    24. 24.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF 123-444;SUBUNIT;INTERACTION WITH VTA1;MUTAGENESIS OF 208-TRP-LEU-209 AND GLY-210
    25. 25.
      "Solution structure of MIT domain from human SKD1."
      RIKEN structural genomics initiative (RSGI)
      Submitted (2005-11) to the PDB data bank
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 1-108
    26. 26.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 1-86 IN COMPLEX WITH CHMP2B;INTERACTION WITH CHMP1B
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