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Index > Protein center > APLF(Gene name) > Human
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  • APLF (Gene name),
  • Aprataxin and PNK-like factor (Protein name ),  APLF_HUMAN from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • 3D
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  • Predicted Eptitope
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  • Vaild Sequence
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  • Gene name:
    APLF(C2orf13;PALF;XIP1);
    Protein name:
    Aprataxin and PNK-like factor;
    Alternative:
    PNK and APTX-like FHA domain-containing protein;Apurinic-apyrimidinic endonuclease APLF;XRCC1-interacting protein 1;
    Organism:
    Human (Homo sapiens). 
    General Annotation
    Sub Unit:
    Interacts with LIG4, PARP1, XRCC1, XRCC4 and XRCC5.
    Function:
    Nuclease involved in single-strand and double-strand DNA break repair. Recruited to sites of DNA damage through interaction with poly(ADP-ribose), a polymeric post-translational modification synthesized transiently at sites of chromosomal damage to accelerate DNA strand break repair reactions. Displays apurinic-apyrimidinic (AP) endonuclease and 3'-5' exonuclease activities in vitro. Also able to introduce nicks at hydroxyuracil and other types of pyrimidine base damage.
    Subcellular Location:
    Nucleus Cytoplasm cytosol Localizes to DNA damage sites. Accumulates at single-strand breaks and double-strand breaks via the PBZ-type zinc fingers.
    Protein Attributes:
    Sequence length:
    511
    Sequence:
    50:
    MSGGFELQPR | DGGPRVALAP | GETVIGRGPL | LGITDKRVSR | RHAILEVAGG | 
    100:
    QLRIKPIHTN | PCFYQSSEKS | QLLPLKPNLW | CYLNPGDSFS | LLVDKYIFRI | 
    150:
    LSIPSEVEMQ | CTLRNSQVLD | EDNILNETPK | SPVINLPHET | TGASQLEGST | 
    200:
    EIAKTQMTPT | NSVSFLGENR | DCNKQQPILA | ERKRILPTWM | LAEHLSDQNL | 
    250:
    SVPAISGGNV | IQGSGKEEIC | KDKSQLNTTQ | QGRRQLISSG | SSENTSAEQD | 
    300:
    TGEECKNTDQ | EESTISSKEM | PQSFSAITLS | NTEMNNIKTN | AQRNKLPIEE | 
    350:
    LGKVSKHKIA | TKRTPHKEDE | AMSCSENCSS | AQGDSLQDES | QGSHSESSSN | 
    400:
    PSNPETLHAK | ATDSVLQGSE | GNKVKRTSCM | YGANCYRKNP | VHFQHFSHPG | 
    450:
    DSDYGGVQIV | GQDETDDRPE | CPYGPSCYRK | NPQHKIEYRH | NTLPVRNVLD | 
    500:
    EDNDNVGQPN | EYDLNDSFLD | DEEEDYEPTD | EDSDWEPGKE | DEEKEDVEEL | 
    511:
    LKEAKRFMKR | K
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    UniGene:
    SMR:
    MIM:
    String:
    Pfam:
    Uniprot:
     
    FOR
    ELISA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    E3951m
    Price:
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    MSDS:
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    Packing:
    96T
    ELISA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    E3951h
    Price:
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    MSDS:
    Please sign in first.
    Packing:
    96T
    Range:
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    ELISA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    E3951b
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    CLIA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    U3951h
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    CLIA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    U3951m
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    CLIA Kit for Human Aprataxin and PNK-like factor
    Cat.:
    U3951b
    Price:
    Please sign in first.
    MSDS:
    Please sign in first.
    Packing:
    96T
    Polyclonal Antibody for Human Aprataxin and PNK-like factor
    Cat.:
    P3951Rb-m
    Price:
    Please sign in first.
    Packing:
    40ug/0.2ml
    Polyclonal Antibody for Human Aprataxin and PNK-like factor
    Cat.:
    P3951Rb-h
    Price:
    Please sign in first.
    Packing:
    40ug/0.2ml
    Polyclonal Antibody for Human Aprataxin and PNK-like factor
    Monoclonal Antibody for Human Aprataxin and PNK-like factor
    Monoclonal Antibody for Human Aprataxin and PNK-like factor
    Monoclonal Antibody for Human Aprataxin and PNK-like factor
    Protein for Human Aprataxin and PNK-like factor
    Protein for Human Aprataxin and PNK-like factor
    Protein for Human Aprataxin and PNK-like factor

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    Precision
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    Linearity
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    References
    1. 1.
      "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T. , Suzuki Y. , Nishikawa T. , Otsuki T. , Sugiyama T. , Irie R. , Wakamatsu A. , Hayashi K. , Sato H. , Nagai K. , Kimura K. , Makita H. , Sekine M. , Obayashi M. , Nishi T. , Shibahara T. , Tanaka T. , Ishii S. , more...
      Nat. Genet.36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      tissue: Liver.
    2. 2.
      "Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
      Hillier L.W. , Graves T.A. , Fulton R.S. , Fulton L.A. , Pepin K.H. , Minx P. , Wagner-McPherson C. , Layman D. , Wylie K. , Sekhon M. , Becker M.C. , Fewell G.A. , Delehaunty K.D. , Miner T.L. , Nash W.E. , Kremitzki C. , Oddy L. , Du H. , more...
      Nature434:724-731(2005) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
    3. 3.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      tissue: Testis.
    4. 4.
      "A novel human AP endonuclease with conserved zinc-finger-like motifs involved in DNA strand break responses."
      Kanno S. , Kuzuoka H. , Sasao S. , Hong Z. , Lan L. , Nakajima S. , Yasui A.
      EMBO J.26:2094-2103(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION;CATALYTIC ACTIVITY;SUBCELLULAR LOCATION;POLY-ADP-RIBOSYLATION;INTERACTION WITH LIG4; PARP1; XRCC4 AND XRCC5
    5. 5.
      "Human Xip1 (C2orf13) is a novel regulator of cellular responses to DNA strand breaks."
      Bekker-Jensen S. , Fugger K. , Danielsen J.R. , Gromova I. , Sehested M. , Celis J. , Bartek J. , Lukas J. , Mailand N.
      J. Biol. Chem.282:19638-19643(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION;INTERACTION WITH XRCC1;PHOSPHORYLATION AT SER-116;MUTAGENESIS OF SER-116
    6. 6.
      "APLF (C2orf13) is a novel human protein involved in the cellular response to chromosomal DNA strand breaks."
      Iles N. , Rulten S. , El-Khamisy S.F. , Caldecott K.W.
      Mol. Cell. Biol.27:3793-3803(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION;INTERACTION WITH PARP1; XRCC1; XRCC4 AND XRCC5;SUBCELLULAR LOCATION;PHOSPHORYLATION
    7. 7.
      "APLF (C2orf13) facilitates nonhomologous end-joining and undergoes ATM-dependent hyperphosphorylation following ionizing radiation."
      Macrae C.J. , McCulloch R.D. , Ylanko J. , Durocher D. , Koch C.A.
      DNA Repair7:292-302(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH XRCC4;PHOSPHORYLATION
    8. 8.
      "APLF (C2orf13) is a novel component of poly(ADP-ribose) signaling in mammalian cells."
      Rulten S.L. , Cortes-Ledesma F. , Guo L. , Iles N.J. , Caldecott K.W.
      Mol. Cell. Biol.28:4620-4628(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION;ADP-RIBOSE-BINDING
    9. 9.
      "Poly(ADP-ribose)-binding zinc finger motifs in DNA repair/checkpoint proteins."
      Ahel I. , Ahel D. , Matsusaka T. , Clark A.J. , Pines J. , Boulton S.J. , West S.C.
      Nature451:81-85(2008) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SUBCELLULAR LOCATION;DOMAIN PBZ-TYPE;POLY-ADP-RIBOSYLATION;ADP-RIBOSE-BINDING;MUTAGENESIS OF ARG-376; CYS-379; CYS-385; CYS-421 AND CYS-427
    10. 10.
      "Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose)."
      Eustermann S. , Brockmann C. , Mehrotra P.V. , Yang J.C. , Loakes D. , West S.C. , Ahel I. , Neuhaus D.
      Nat. Struct. Mol. Biol.17:241-243(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 368-451 ALONE AND IN COMPLEX WITH ADP-RIBOSE ANALOG;POLY-ADP-RIBOSE BINDING SITES
    11. 11.
      "Structure and identification of ADP-ribose recognition motifs of APLF and role in the DNA damage response."
      Li G.Y. , McCulloch R.D. , Fenton A.L. , Cheung M. , Meng L. , Ikura M. , Koch C.A.
      Proc. Natl. Acad. Sci. U.S.A.107:9129-9134(2010) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: STRUCTURE BY NMR OF 360-448;LINKER REGION;POLY-ADP-RIBOSE BINDING SITES
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