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Index > Protein center > Ddx39b(Gene name) > Mouse
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  • Ddx39b (Gene name),
  • Spliceosome RNA helicase Ddx39b (Protein name ),  DX39B_MOUSE from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • Predicted Eptitope
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  • Vaild Sequence
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  • Gene name:
    Ddx39b(Bat1;Bat1a;Uap56);
    Protein name:
    Spliceosome RNA helicase Ddx39b;
    Alternative:
    DEAD box protein UAP56;56 kDa U2AF65-associated protein;HLA-B-associated transcript 1 protein;
    Organism:
    Mouse (Mus musculus). 
    General Annotation
    Sub Unit:
    Homodimer, and heterodimer with DDX39A. Component of the THO complex, which is composed of THOC1, THOC2, THOC5, THOC6 and THOC7. Together with THOC3, THOC4 and DDX39B, THO forms the transcription/export (TREX) complex. Component of the spliceosome. Interacts directly with U2AF2. Interacts directly with THOC4 and is necessary for THOC4 recruitment to spliced mRNA. Interacts with RBM8A, RNPS1 and SRRM1. Interacts with FYTTD1/UIF and THOC1.
    Function:
    Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and THOC4.
    Subcellular Location:
    Nucleus Nucleus speckle
    Protein Attributes:
    Sequence length:
    428
    Sequence:
    50:
    MAENDVDNEL | LDYEDDEVET | AAGADGTEAP | AKKDVKGSYV | SIHSSGFRDF | 
    100:
    LLKPELLRAI | VDCGFEHPSE | VQHECIPQAI | LGMDVLCQAK | SGMGKTAVFV | 
    150:
    LATLQQLEPV | TGQVSVLVMC | HTRELAFQIS | KEYERFSKYM | PNVKVAVFFG | 
    200:
    GLSIKKDEEV | LKKNCPHIVV | GTPGRILALA | RNKSLNLKHI | KHFILDECDK | 
    250:
    MLEQLDMRRD | VQEIFRMTPH | EKQVMMFSAT | LSKEIRPVCR | KFMQDPMEIF | 
    300:
    VDDETKLTLH | GLQQYYVKLK | DNEKNRKLFD | LLDVLEFNQV | VIFVKSVQRC | 
    350:
    IALAQLLVEQ | NFPAIAIHRG | MPQEERLSRY | QQFKDFQRRI | LVATNLFGRG | 
    400:
    MDIERVNIAF | NYDMPEDSDT | YLHRVARAGR | FGTKGLAITF | VSDENDAKIL | 
    428:
    NDVQDRFEVN | ISELPDEIDI | SSYIEQTR
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    Pfam:
    String:
    KEGG:
    SMR:
    UniGene:
    Uniprot:
     
    FOR
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    ELISA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    CLIA Kit for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Polyclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Monoclonal Antibody for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b
    Protein for Mouse Spliceosome RNA helicase Ddx39b

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    References
    1. 1.
      "Sequence analysis of a mouse homolog of the human BAT1 gene (nuclear RNA helicase of the DEAD box protein family)."
      Handel-Fernandez M.E. , Vincek V.
      Submitted (1999-01) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA]
      strain: C57BL/10.
    2. 2.
      "Characterization of murine Bat1, a putative immunoregulator of Tnfa."
      Dolecki K.J. , Wong A.M.L. , Price P.
      Submitted (2003-03) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA]
      strain: BALB/c.
      strain: C57BL/10 X DBA/2.
    3. 3.
      "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse."
      Xie T. , Rowen L. , Aguado B. , Ahearn M.E. , Madan A. , Qin S. , Campbell R.D. , Hood L.
      Genome Res.13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
      strain: 129.
    4. 4.
      "The transcriptional landscape of the mammalian genome."
      Carninci P. , Kasukawa T. , Katayama S. , Gough J. , Frith M.C. , Maeda N. , Oyama R. , Ravasi T. , Lenhard B. , Wells C. , Kodzius R. , Shimokawa K. , Bajic V.B. , Brenner S.E. , Batalov S. , Forrest A.R. , Zavolan M. , Davis M.J. , more...
      Science309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      strain: C57BL/6J.
      strain: NOD.
      tissue: Embryo.
      tissue: Thymus.
    5. 5.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]
      strain: FVB/N.
      tissue: Eye.
      tissue: Mammary tumor.
    6. 6.
      Lubec G. , Kang S.U.
      Submitted (2007-04) to the UniProtKB
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: PROTEIN SEQUENCE OF 145-155;IDENTIFICATION BY MASS SPECTROMETRY
      strain: C57BL/6.
      tissue: Brain.
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