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Index > Protein center > H2afy(Gene name) > Rat
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  • H2afy (Gene name),
  • Core histone macro-H2A.1 (Protein name ),  H2AY_RAT from NCBI database.
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  • General Annotation
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  • Antigen Annotation
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  • Gene name:
    H2afy;
    Protein name:
    Core histone macro-H2A.1(Histone macroH2A1;mH2A1);
    Alternative:
    H2A/y;H2A.y;
    Organism:
    Rat (Rattus norvegicus). 
    General Annotation
    Sub Unit:
    The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. Interacts with SPOP. Part of a complex consisting of H2AFY, CUL3 and SPOP. Interacts with HDAC1 and HDAC2.
    Function:
    Variant histone H2A which replaces conventional H2A in a subset of nucleosomes where it represses transcription. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Involved in stable X chromosome inactivation. Inhibits the binding of transcription factors and interferes with the activity of remodeling SWI/SNF complexes. Inhibits histone acetylation by EP300 and recruits class I HDACs, which induces an hypoacetylated state of chromatin. In addition, isoform 1, but not isoform 2, binds ADP-ribose and O-acetyl-ADP-ribose, and may be involved in ADP-ribose-mediated chromatin modulation.
    Subcellular Location:
    Nucleus Chromosome Enriched in inactive X chromosome chromatin and in senescence-associated heterochromatin.
    Protein Attributes:
    Sequence length:
    371
    Sequence:
    50:
    MSSRGGKKKS | TKTSRSAKAG | VIFPVGRMLR | YIKKGHPKYR | IGVGAPVYMA | 
    100:
    AVLEYLTAEI | LELAGNAARD | NKKGRVTPRH | ILLAVANDEE | LNQLLKGVTI | 
    150:
    ASGGVLPNIH | PELLAKKRGS | KGKLEAIITP | PPAKKAKSPS | QKKPVAKKTG | 
    200:
    GKKGARKSKK | QGEVSKAASA | DSTTEGAPTD | GFTVLSTKSL | FLGQKLNLIH | 
    250:
    SEISNLAGFE | VEAIINPTNA | DIDLKDDLGS | TLEKKGGKEF | VEAVLELRKK | 
    300:
    NGPLEVAGAA | VSAGHGLPAK | FVIHCNSPVW | GADKCEELLE | KTVKNCLALA | 
    350:
    DDRKLKSIAF | PSIGSGRNGF | PKQTAAQLIL | KAISSYFVST | MSSSIKTVYF | 
    371:
    VLFDSESIGI | YVQEMAKLDA | N
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    SMR:
    UniGene:
    String:
    Pfam:
    KEGG:
    Uniprot:
     
    FOR
    ELISA Kit for Rat Histone macroH2A1
    ELISA Kit for Rat Histone macroH2A1
    ELISA Kit for Rat Histone macroH2A1
    ELISA Kit for Rat Histone macroH2A1
    CLIA Kit for Rat Histone macroH2A1
    CLIA Kit for Rat Histone macroH2A1
    CLIA Kit for Rat Histone macroH2A1
    CLIA Kit for Rat Histone macroH2A1
    Polyclonal Antibody for Rat Histone macroH2A1
    Polyclonal Antibody for Rat Histone macroH2A1
    Polyclonal Antibody for Rat Histone macroH2A1
    Polyclonal Antibody for Rat Histone macroH2A1
    Monoclonal Antibody for Rat Histone macroH2A1
    Monoclonal Antibody for Rat Histone macroH2A1
    Monoclonal Antibody for Rat Histone macroH2A1
    Monoclonal Antibody for Rat Histone macroH2A1
    Protein for Rat Histone macroH2A1
    Protein for Rat Histone macroH2A1
    Protein for Rat Histone macroH2A1
    Protein for Rat Histone macroH2A1

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    References
    1. 1.
      "MacroH2A, a core histone containing a large nonhistone region."
      Pehrson J.R. , Fried V.A.
      Science257:1398-1400(1992) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2);PARTIAL PROTEIN SEQUENCE
      tissue: Liver.
    2. 2.
      Pehrson J.R.
      Submitted (2006-02) to the EMBL/GenBank/DDBJ databases
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: SEQUENCE REVISION (ISOFORM 1)
    3. 3.
      "Developmental and tissue expression patterns of histone macroH2A1 subtypes."
      Pehrson J.R. , Costanzi C. , Dharia C.
      J. Cell. Biochem.65:107-113(1997) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2);TISSUE SPECIFICITY
      tissue: Thymus.
    4. 4.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2)
      strain: Brown Norway.
      tissue: Kidney.
    5. 5.
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 181-371 (ISOFORM 1);FUNCTION
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