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Index > Protein center > Smarcb1(Gene name) > Mouse
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  • Smarcb1 (Gene name),
  • SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 (Protein name ),  SNF5_MOUSE from NCBI database.
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  • Gene name:
    Smarcb1(Baf47;Ini1;Snf5l1);
    Protein name:
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1;
    Alternative:
    Integrase interactor 1 protein;BRG1-associated factor 47(BAF47);SNF5 homolog(mSNF5);
    Organism:
    Mouse (Mus musculus). 
    General Annotation
    Sub Unit:
    Component of the BAF (hSWI/SNF) complex, which includes at least actin (ACTB), ARID1A, ARID1B/BAF250, SMARCA2, SMARCA4/BRG1/BAF190A, ACTL6A/BAF53, ACTL6B/BAF53B, SMARCE1/BAF57 SMARCC1/BAF155, SMARCC2/BAF170, SMARCB1/SNF5/INI1, and one or more of SMARCD1/BAF60A, SMARCD2/BAF60B, or SMARCD3/BAF60C. In muscle cells, the BAF complex also contains DPF3. Component of the WINAC complex, at least composed of SMARCA2, SMARCA4, SMARCB1, SMARCC1, SMARCC2, SMARCD1, SMARCE1, ACTL6A, BAZ1B/WSTF, ARID1A, SUPT16H, CHAF1A and TOP2B. Interacts with MYK and MAEL. Interacts with PPP1R15A (By similarity). Component of neural progenitors-specific chromatin remodeling complex (npBAF complex) composed of at least, ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A and actin. Component of neuron-specific chromatin remodeling complex (nBAF complex) composed of at least, ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, DPF1/BAF45B, DPF3/BAF45C, ACTL6B/BAF53B and actin.
    Function:
    Core component of the BAF (SWI/SNF) complex. This ATP-dependent chromatin-remodeling complex plays important roles in cell proliferation and differentiation, in cellular antiviral activities and inhibition of tumor formation. The BAF complex is able to create a stable, altered form of chromatin that constrains fewer negative supercoils than normal. This change in supercoiling would be due to the conversion of up to one-half of the nucleosomes on polynucleosomal arrays into asymmetric structures, termed altosomes, each composed of 2 histones octamers. Stimulates in vitro the remodeling activity of SMARCA4/BRG1/BAF190A. Plays a key role in cell-cycle control and causes cell cycle arrest in G0/G1. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene (By similarity). Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.
    Subcellular Location:
    Nucleus
    Protein Attributes:
    Sequence length:
    385
    Sequence:
    50:
    MMMMALSKTF | GQKPVKFQLE | DDGEFYMIGS | EVGNYLRMFR | GSLYKRYPSL | 
    100:
    WRRLATVEER | KKIVASSHGK | KTKPNTKDHG | YTTLATSVTL | LKASEVEEIL | 
    150:
    DGNDEKYKAV | SISTEPPTYL | REQKAKRNSQ | WVPTLPNSSH | HLDAVPCSTT | 
    200:
    INRNRMGRDK | KRTFPLCFDD | HDPAVIHENA | SQPEVLVPIR | LDMEIDGQKL | 
    250:
    RDAFTWNMNE | KLMTPEMFSE | ILCDDLDLNP | LTFVPAIASA | IRQQIESYPT | 
    300:
    DSILEDQSDQ | RVIIKLNIHV | GNISLVDQFE | WDMSEKENSP | EKFALKLCSE | 
    350:
    LGLGGEFVTT | IAYSIRGQLS | WHQKTYAFSE | NPLPTVEIAI | RNTGDADQWC | 
    385:
    PLLETLTDAE | MEKKIRDQDR | NTRRMRRLAN | TAPAW
    3D Structure:
    N/A
    Predicted Eptitope:
    Please Sign in.
    EIAab Sequence  Vaild Sequence:
    Please Sign in.
    Related Databases
    Pfam:
    UniGene:
    KEGG:
    String:
    Uniprot:
     
    FOR
    ELISA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    ELISA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    ELISA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    ELISA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    CLIA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    CLIA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    CLIA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    CLIA Kit for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Polyclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Polyclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Polyclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Polyclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Monoclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Monoclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Monoclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Monoclonal Antibody for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Protein for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Protein for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Protein for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
    Protein for Mouse SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

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    Precision
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    Linearity
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    References
    1. 1.
      "The mouse ortholog of the human SMARCB1 gene encodes two splice forms."
      Bruder C.E. , Dumanski J.P. , Kedra D.
      Biochem. Biophys. Res. Commun.257:886-890(1999) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A AND B)
    2. 2.
      "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res.14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM A)
      strain: C57BL/6J.
      tissue: Tongue.
    3. 3.
      "Mouse MAELSTROM: the link between meiotic silencing of unsynapsed chromatin and microRNA pathway?"
      Costa Y. , Speed R.M. , Gautier P. , Semple C.A. , Maratou K. , Turner J.M.A. , Cooke H.J.
      Hum. Mol. Genet.15:2324-2334(2006) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: INTERACTION WITH MAEL
    4. 4.
      "An essential switch in subunit composition of a chromatin remodeling complex during neural development."
      Lessard J. , Wu J.I. , Ranish J.A. , Wan M. , Winslow M.M. , Staahl B.T. , Wu H. , Aebersold R. , Graef I.A. , Crabtree G.R.
      Neuron55:201-215(2007) [PubMed] [Europe PMC] [Abstract]
      [15/1/25 17:38] Upload to ab completed in less than a minute: 1 file transferred (13.4 Kb/s) Cited for: FUNCTION OF THE NBAF AND NPBAF COMPLEXES;IDENTIFICATION BY MASS SPECTROMETRY;IDENTIFICATION IN THE NBAF AND NPBAF COMPLEXES;DEVELOPMENTAL STAGE
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